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PhysiCell
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physiCell
Tutorials & resources:
PhysiCell Summer School 2021 Youtube channel
PhysiCell Summer School 2021 Youtube channel
Click
https://www.youtube.com/channel/UCIz_b1Ux5n6cqaaBav12W5w/videos?view=0&sort=dd&shelf_id=0
link to open resource.
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PhysiCell Summer School 2021
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PhysiCell Summer School 2022
Table of contents
PhysiCell
test
Tool repositories
PhysiCell repositories
PhysiCell webpage
PhysiCell on bio.tools
Prior Knowledge needed for this tool:
Command line (mac, linux, windows) 1
Command line (mac, linux, windows) 2
C++ programing language + compiling
Recommended: basics of Slurm or some other job submission system
Basic XML syntax for setting files
Scripting language (matlab/python) for postprocessing outputs
Scripting language (matlab/python) for postprocessing outputs 2
Tutorials & resources:
PhysiCell tutorials
PhysiCell Summer School 2021
PhysiCell Summer School 2021 Youtube channel
PhysiCell Summer School 2022
PhysiCell Summer School 2022 Youtube channel
MaBoSS tutorials
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