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PhysiCell
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physiCell
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1
PhysiCell
Welcome to PhysiCell course! Here you can find man...
PhysiCell is a multi-scale agent-based framework f...
PhysiCell-MPI / PhysiCell-X video presentation&nbs...
test
2
Tool repositories
PhysiCell repositories
PhysiCell webpage
PhysiCell on bio.tools
3
Tools platforms/specifics
PhysiCell: Windows, UNIX, MacOSPhysiCell-X (PhysiC...
4
Prior Knowledge needed for this tool:
Command line (mac, linux, windows) 1
Command line (mac, linux, windows) 2
C++ programing language + compiling
Recommended: basics of Slurm or some other job submission system
Basic XML syntax for setting files
Scripting language (matlab/python) for postprocessing outputs
Scripting language (matlab/python) for postprocessing outputs 2
5
Tutorials & resources:
PhysiCell tutorials
PhysiCell Summer School 2021
PhysiCell Summer School 2021 Youtube channel
PhysiCell Summer School 2022
PhysiCell Summer School 2022 Youtube channel
MaBoSS tutorials
PerMedCoE Webinar: Biomedicine & supercomputer...
PhysiCell-MPI / PhysiCell-X, by Gaurav Saxena (ISM...
Oznaka
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