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    • SlovenščinaslSlovenščina

Hands-on workshop in Marine Metagenomics

  1. Home
  2. Courses
  3. ELIXIR Norway
  4. MMetagen_NO_2018
  5. Day 1 - Monday, 26th November
  6. Visualization of amplicon data with MicrobiomeAnal...

Visualization of amplicon data with MicrobiomeAnalyst - example of results

Completion requirements
    • visualization visualization
      • metadata_all.txt metadata_all.txt
      • table-with-taxonomy.biom table-with-taxonomy.biom
PreviousExercise: Visualization of amplicon data using MicrobiomeAnalyst
Next15:00 - 15:30    Cofee break

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          • Introduction to Linux Command Line

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          • Group work - Friday

          • Day 1 - Monday, 26th November

            • FileLecture: Crash course how to use EeLP

            • FileLecture: Introduction the VM and practical exercises

            • FileExercise: Introduction to the VM and practical exercises

            • FileLecture: Introduction to metagenomics

            • FileLecture: Intro Linux and Anaconda

            • FileExercise: Intro Linux and Anconda

            • FileLecture: Seqtech

            • FileLecture: Quality control and trimming

            • FileLecture: Community profiling - Amplicon sequencing

            • FileExercise: Amplicon data analysis using Qiime2

            • FileExercise: Visualization of amplicon data using MicrobiomeAnalyst

            • FolderVisualization of amplicon data with MicrobiomeAnal...

          • Day 2 - Tuesday, 27th November

          • Day 3 - Wednesday, 28th November

          • Day 4 - Thursday, 29th November

          • Day 5 - Friday, 30th November

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