Section outline

◄Day 2 - Tuesday, 27th November
►Day 4 - Thursday, 29th November

    • 09:00 - 09:30

      Summary day 2

    • 09:30 – 10:30

      Taxonomic classification of metagenomics samples (Erik)

    • Lecture: Taxonomy Datoteka

    • 10:30 - 11:00    Coffee break

    • 11:00 – 11:30

      New data resources for marine metagenomics (Nils)

    • Lecture: New marine data resources Datoteka

    • 11:30 – 12:30

      Hands on - Taxonomic classification and functional assignment

    • Exercise: Taxonomic profiling Datoteka
    • Exercise: Functional assignment Datoteka

      This exercises includes submission of jobs to META-pipe

      Location of preprocessed files (META-pipe results) in VMs:

      /practical/4/preprocessed.tar.gz

      How to decompress the preprocessed files with META-pipe results:

      cd /practical/4

      tar -xzvf preprocessed.tar.gz

      Open Artemis by typing:

      art

      in the terminal

    • 12:30 – 13:30    Lunch

    • 13:30 – 15:30

      Hands on - Taxonomic classification and functional assignment (cont.)

    • 15:30 – 16:00    Coffee break

    • 16:00 - 18:00

      Hands-on - Taxonomic classification and functional assignment (cont.)

◄Day 2 - Tuesday, 27th November
►Day 4 - Thursday, 29th November