Section: Prior Knowledge needed for this tool: | CellNOpt | ELIXIR-SI

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Dear participant!
If this is your firs time working with CellNOpt we suggest you start here. We have collected some links to tutorials that will help you gain basic knowledge needed for this tool.
- Select activity Basic knowledge of Rhttps://datacarpentry.org/R-ec...
  
  Basic knowledge of R
  https://datacarpentry.org/R-ecology-lesson/01-intro-to-r.html
  http://swcarpentry.github.io/r-novice-inflammation/
  http://al2na.github.io/compgenr/
  Data processing and normalization methods for proteomics/phosphoproteomics
  https://www.bioconductor.org/packages/release/data/experiment/vignettes/RforProteomics/inst/doc/RforProteomics.html
  https://www.ebi.ac.uk/training/online/courses/methods-in-bioinformatics/discovering-biological-information-from-mass-spectrometry-based-proteomics/
  https://www.ebi.ac.uk/training/materials/proteomics-bioinformatics-materials/protein-quantification/quantitative-proteomics-kathryn-lilley/
  Basic understanding of signalling networks (graphs including activation and inhibitions)
- Select activity MIDAS format file for the experiments (how to create the input files in the right format)
  
  MIDAS format file for the experiments (how to create the input files in the right format) URL

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